Publications
Presentations
Projects
Software
Nina Jeliazkova
AMBIT
AMBIT project site
http://ambit.sourceforge.net
AMBIT-JSON
OpenTox API JSON extension
Example: tautomers
Examples how to use ambit2-tautomer package
Example: SMIRKS
Examples how to use AMBIT SMIRKS implementation
Example: applicability domain
Examples how to use applicability domain methods in AMBIT
OpenTox
AMBIT
AMBIT
is an implementation of the
OpenTox REST API
(and more)
OpenTox client
OpenTox Java client library
OpenTox Authentication and Authorization client library
source code (Java)
OpenTox Policy service
source code (Java)
OpenTox wrapper
A wrapper for external toxicity prediction models as OpenTox algorithm and model services
All public code repositories
at GitHub
https://github.com/vedina
https://github.com/ideaconsult
at sourceforge.net
https://sourceforge.net/p/ambit
https://sourceforge.net/p/toxtree
https://sourceforge.net/p/qmrf
https://sourceforge.net/p/toxmatch
Toxtree
Toxtree project site
http://toxtree.sourceforge.net
Toxmatch
Toxmatch web page
http://toxmatch.sf.net
Toxmatch 1.x
ToxMatch
Toxbank
Toxbank web services client
https://github.com/ToxBank/toxbank-api-client
Toxbank protocol web services
https://github.com/ToxBank/toxbank-api-server
Toxbank
ISA-TAB
to
RDF
convertor
https://github.com/ToxBank/isa2rdf
Toxbank
ISA Creator
plugins
https://github.com/ToxBank/toxbank-isa-plugin
OpenTox
ISA Creator
plugins
https://github.com/vedina/opentox-isa-plugin
The Chemistry Development Kit examples
Examples: CDK
Simple Maven Project example
, using
The Chemistry Development Kit
as dependency.